MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Bacteroides acidifaciens
19428wH3_P2318
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 233
bases: 5,137,552 bps
CDS: 4,380
rRNA: 8
Repeat region:
tmRNA: 1
tRNA: 70
misc RNA:
Total features: 4,459
Total number of protein coding genes annotated/found:
4,380
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Items 41 - 60
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of 220 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5013|JADGKQ010000108.1
SEQF5013_00054
Genome Viewer
NA
AA
558/186
758-201
hypothetical protein
SEQF5013|JADGKQ010000108.1
SEQF5013_00055
Genome Viewer
NA
AA
837/279
1132-1968
hypothetical protein
SEQF5013|JADGKQ010000108.1
SEQF5013_00056
Genome Viewer
NA
AA
603/201
2781-2179
IS256 family transposase ISSde5
SEQF5013|JADGKQ010000108.1
SEQF5013_00057
Genome Viewer
NA
AA
732/244
3579-2848
IS21 family transposase ISBmu3
SEQF5013|JADGKQ010000108.1
SEQF5013_00058
Genome Viewer
NA
AA
1518/506
5109-3592
hypothetical protein
SEQF5013|JADGKQ010000109.1
SEQF5013_00059
Genome Viewer
NA
AA
108/36
412-305
hypothetical protein
SEQF5013|JADGKQ010000109.1
SEQF5013_00061
Genome Viewer
NA
AA
297/99
2109-1813
hypothetical protein
SEQF5013|JADGKQ010000109.1
SEQF5013_00062
Genome Viewer
NA
AA
699/233
2808-2110
hypothetical protein
SEQF5013|JADGKQ010000109.1
SEQF5013_00063
Genome Viewer
NA
AA
1563/521
3040-4602
hypothetical protein
SEQF5013|JADGKQ010000010.1
SEQF5013_00065
Genome Viewer
NA
AA
585/195
1758-1174
dITP/XTP pyrophosphatase
SEQF5013|JADGKQ010000010.1
SEQF5013_00066
Genome Viewer
NA
AA
918/306
2723-1806
hypothetical protein
SEQF5013|JADGKQ010000010.1
SEQF5013_00071
Genome Viewer
NA
AA
918/306
12223-11306
hypothetical protein
SEQF5013|JADGKQ010000010.1
SEQF5013_00074
Genome Viewer
NA
AA
153/51
15332-15180
hypothetical protein
SEQF5013|JADGKQ010000010.1
SEQF5013_00075
Genome Viewer
NA
AA
870/290
16341-15472
hypothetical protein
SEQF5013|JADGKQ010000010.1
SEQF5013_00077
Genome Viewer
NA
AA
1047/349
20502-21548
4-O-beta-D-mannosyl-D-glucose phosphorylase
SEQF5013|JADGKQ010000010.1
SEQF5013_00078
Genome Viewer
NA
AA
1248/416
21567-22814
hypothetical protein
SEQF5013|JADGKQ010000010.1
SEQF5013_00079
Genome Viewer
NA
AA
1161/387
22983-24143
hypothetical protein
SEQF5013|JADGKQ010000010.1
SEQF5013_00080
Genome Viewer
NA
AA
3168/1056
24152-27319
TonB-dependent receptor P26
SEQF5013|JADGKQ010000010.1
SEQF5013_00081
Genome Viewer
NA
AA
1941/647
27334-29274
hypothetical protein
SEQF5013|JADGKQ010000010.1
SEQF5013_00082
Genome Viewer
NA
AA
729/243
29308-30036
hypothetical protein
🡄
Items 41 - 60
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of 220 pages
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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